Bacteria Detection
Colony detection and classification under the microscope
A Mask R-CNN finds bacterial colonies on microscope images and labels each of the 8 classes with a confidence score.
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Algorithm
Stack
- Python 3.8
- Kedro
- MLFlow
- Pytorch
- LabelMe
Dataset
- 8 bacteria classes
- Vector labeling
- PNG/JPEG
- No augmentation
Training
- MaskRCNN
- 90 epochs
- GTX1080TI
Model
